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Biogeochemical cycle
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{{Short description|Chemical transfer pathway between Earth’s biological and non-biological parts}}{{biogeochemical cycle sidebar}}A biogeochemical cycle, or more generally a cycle of matter,WEB, CK12-Foundation,flexbooks.ck12.org/cbook/ck-12-college-human-biology-flexbook-2.0/section/24.7/primary/lesson/cycles-of-matter-chumbio/, 2022-03-21, flexbooks.ck12.org, is the movement and transformation of chemical elements and compounds between living organisms, the atmosphere, and the Earth’s crust. Major biogeochemical cycles include the carbon cycle, the nitrogen cycle and the water cycle. In each cycle, the chemical element or molecule is transformed and cycled by living organisms and through various geological forms and reservoirs, including the atmosphere, the soil and the oceans. It can be thought of as the pathway by which a chemical substance (Wiktionary:cycle|cycles) (is turned over or moves through) the biotic compartment and the abiotic compartments of Earth. The biotic compartment is the biosphere and the abiotic compartments are the atmosphere, lithosphere and hydrosphere.For example, in the carbon cycle, atmospheric carbon dioxide is absorbed by plants through photosynthesis, which converts it into organic compounds that are used by organisms for energy and growth. Carbon is then released back into the atmosphere through respiration and decomposition. Additionally, carbon is stored in fossil fuels and is released into the atmosphere through human activities such as burning fossil fuels. In the nitrogen cycle, atmospheric nitrogen gas is converted by plants into usable forms such as ammonia and nitrates through the process of nitrogen fixation. These compounds can be used by other organisms, and nitrogen is returned to the atmosphere through denitrification and other processes. In the water cycle, the universal solvent water evaporates from land and oceans to form clouds in the atmosphere, and then precipitates back to different parts of the planet. Precipitation can seep into the ground and become part of groundwater systems used by plants and other organisms, or can runoff the surface to form lakes and rivers. Subterranean water can then seep into the ocean along with river discharges, rich with dissolved and particulate organic matter and other nutrients.There are biogeochemical cycles for many other elements, such as for oxygen, hydrogen, phosphorus, calcium, iron, sulfur, mercury and selenium. There are also cycles for molecules, such as water and silica. In addition there are macroscopic cycles such as the rock cycle, and human-induced cycles for synthetic compounds such as for polychlorinated biphenyls (PCBs). In some cycles there are geological reservoirs where substances can remain or be (:Wiktionary:sequestered|sequestered) for long periods of time.Biogeochemical cycles involve the interaction of biological, geological, and chemical processes. Biological processes include the influence of microorganisms, which are critical drivers of biogeochemical cycling. Microorganisms have the ability to carry out wide ranges of metabolic processes essential for the cycling of nutrients and chemicals throughout global ecosystems. Without microorganisms many of these processes would not occur, with significant impact on the functioning of land and ocean ecosystems and the planet’s biogeochemical cycles as a whole. Changes to cycles can impact human health. The cycles are interconnected and play important roles regulating climate, supporting the growth of plants, phytoplankton and other organisms, and maintaining the health of ecosystems generally. Human activities such as burning fossil fuels and using large amounts of fertilizer can disrupt cycles, contributing to climate change, pollution, and other environmental problems.

Overview

(File:Generalized biogeochemical cycle.jpg|thumb|upright=1.2| Generalized biogeochemical cycle)(File:The Nitrogen Cycle (1).png|thumb|upright=1.2| Simplified version of the nitrogen cycle)Energy flows directionally through ecosystems, entering as sunlight (or inorganic molecules for chemoautotrophs) and leaving as heat during the many transfers between trophic levels. However, the matter that makes up living organisms is conserved and recycled. The six most common elements associated with organic molecules — carbon, nitrogen, hydrogen, oxygen, phosphorus, and sulfur — take a variety of chemical forms and may exist for long periods in the atmosphere, on land, in water, or beneath the Earth’s surface. Geologic processes, such as weathering, erosion, water drainage, and the subduction of the continental plates, all play a role in this recycling of materials. Because geology and chemistry have major roles in the study of this process, the recycling of inorganic matter between living organisms and their environment is called a biogeochemical cycle.Biogeochemical Cycles {{Webarchive|url=https://web.archive.org/web/20210927040316cnx.org/contents/ZdFkREJc@7/Biogeochemical-Cycles |date=2021-09-27 }}, OpenStax, 9 May 2019. (File:CC-BY icon.svg|50px) Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.The six aforementioned elements are used by organisms in a variety of ways. Hydrogen and oxygen are found in water and organic molecules, both of which are essential to life. Carbon is found in all organic molecules, whereas nitrogen is an important component of nucleic acids and proteins. Phosphorus is used to make nucleic acids and the phospholipids that comprise biological membranes. Sulfur is critical to the three-dimensional shape of proteins. The cycling of these elements is interconnected. For example, the movement of water is critical for leaching sulfur and phosphorus into rivers which can then flow into oceans. Minerals cycle through the biosphere between the biotic and abiotic components and from one organism to another.Fisher M. R. (Ed.) (2019) Environmental Biology, 3.2 Biogeochemical Cycles {{Webarchive|url=https://web.archive.org/web/20210927040314openoregon.pressbooks.pub/envirobiology/chapter/3-2-biogeochemical-cycles/ |date=2021-09-27 }}, OpenStax. (File:CC-BY icon.svg|50px) Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.Ecological systems (ecosystems) have many biogeochemical cycles operating as a part of the system, for example, the water cycle, the carbon cycle, the nitrogen cycle, etc. All chemical elements occurring in organisms are part of biogeochemical cycles. In addition to being a part of living organisms, these chemical elements also cycle through abiotic factors of ecosystems such as water (hydrosphere), land (lithosphere), and/or the air (atmosphere).WEB, Biogeochemical Cycles,www.enviroliteracy.org/subcategory.php/198.html, The Environmental Literacy Council, 20 November 2017, 30 April 2015,enviroliteracy.org/subcategory.php/198.html," title="web.archive.org/web/20150430133927enviroliteracy.org/subcategory.php/198.html,">web.archive.org/web/20150430133927enviroliteracy.org/subcategory.php/198.html, live, The living factors of the planet can be referred to collectively as the biosphere. All the nutrients — such as carbon, nitrogen, oxygen, phosphorus, and sulfur — used in ecosystems by living organisms are a part of a closed system; therefore, these chemicals are recycled instead of being lost and replenished constantly such as in an open system.The major parts of the biosphere are connected by the flow of chemical elements and compounds in biogeochemical cycles. In many of these cycles, the biota plays an important role. Matter from the Earth’s interior is released by volcanoes. The atmosphere exchanges some compounds and elements rapidly with the biota and oceans. Exchanges of materials between rocks, soils, and the oceans are generally slower by comparison.Moses, M. (2012) Biogeochemical cycles {{Webarchive|url=https://web.archive.org/web/20211122221017editors.eol.org/eoearth/wiki/Biogeochemical_cycles |date=2021-11-22 }}. Encyclopedia of Earth.The flow of energy in an ecosystem is an open system; the Sun constantly gives the planet energy in the form of light while it is eventually used and lost in the form of heat throughout the trophic levels of a food web. Carbon is used to make carbohydrates, fats, and proteins, the major sources of food energy. These compounds are oxidized to release carbon dioxide, which can be captured by plants to make organic compounds. The chemical reaction is powered by the light energy of sunshine.Sunlight is required to combine carbon with hydrogen and oxygen into an energy source, but ecosystems in the deep sea, where no sunlight can penetrate, obtain energy from sulfur. Hydrogen sulfide near hydrothermal vents can be utilized by organisms such as the giant tube worm. In the sulfur cycle, sulfur can be forever recycled as a source of energy. Energy can be released through the oxidation and reduction of sulfur compounds (e.g., oxidizing elemental sulfur to sulfite and then to sulfate).File:BIOGEOCHEMICAL CYCLING OF ELEMENTS.svg| Examples of major biogeochemical processesFile:WhalePump.jpg|The oceanic whale pump showing how whales cycle nutrients through the ocean water columnFile:Global carbon cycle.webp|The implications of shifts in the global carbon cycle due to human activity are concerning scientists.Avelar, S., van der Voort, T.S. and Eglinton, T.I. (2017) “Relevance of carbon stocks of marine sediments for national greenhouse gas inventories of maritime nations”. Carbon balance and management, 12(1): 10.{{doi|10.1186/s13021-017-0077-x}}. (File:CC-BY icon.svg|50px) Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License. {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.Although the Earth constantly receives energy from the Sun, its chemical composition is essentially fixed, as the additional matter is only occasionally added by meteorites. Because this chemical composition is not replenished like energy, all processes that depend on these chemicals must be recycled. These cycles include both the living biosphere and the nonliving lithosphere, atmosphere, and hydrosphere.Biogeochemical cycles can be contrasted with geochemical cycles. The latter deals only with crustal and subcrustal reservoirs even though some process from both overlap.

Compartments

Atmosphere

Hydrosphere

{{see also|Marine biogeochemical cycles}}File:90 mile beach.jpg|thumb|upright=1.6| BeachBeachFile:Role of marine organisms in biogeochemical cycling.jpg|thumb|upright=1.6| Some roles of marine organisms in biogeochemical cycling in the Southern OceanJOURNAL, Changing Biogeochemistry of the Southern Ocean and Its Ecosystem Implications, 2020, 10.3389/fmars.2020.00581, free, Henley, Sian F., Cavan, Emma L., Fawcett, Sarah E., Kerr, Rodrigo, Monteiro, Thiago, Sherrell, Robert M., Bowie, Andrew R., Boyd, Philip W., Barnes, David K. A., Schloss, Irene R., Marshall, Tanya, Flynn, Raquel, Smith, Shantelle, Frontiers in Marine Science, 7, 11336/128446, free, (File:CC-BY icon.svg|50px)( Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.)The global ocean covers more than 70% of the Earth’s surface and is remarkably heterogeneous. Marine productive areas, and coastal ecosystems comprise a minor fraction of the ocean in terms of surface area, yet have an enormous impact on global biogeochemical cycles carried out by microbial communities, which represent 90% of the ocean’s biomass.JOURNAL, 10.1007/s12526-011-0084-1, The Census of Marine Life—evolution of worldwide marine biodiversity research, 2011, Alexander, Vera, Miloslavich, Patricia, Yarincik, Kristen, Marine Biodiversity, 41, 4, 545–554, 25888475, free, 2011MarBd..41..545A, Work in recent years has largely focused on cycling of carbon and macronutrients such as nitrogen, phosphorus, and silicate: other important elements such as sulfur or trace elements have been less studied, reflecting associated technical and logistical issues. Increasingly, these marine areas, and the taxa that form their ecosystems, are subject to significant anthropogenic pressure, impacting marine life and recycling of energy and nutrients.Galton, D. (1884) 10th Meeting: report of the royal commission on metropolitan sewage {{Webarchive|url=https://web.archive.org/web/20210924063154www.proquest.com/openview/792c496cb0a1bdf11778db87c126ff44/1?pq-origsite=gscholar&cbl=1816417 |date=2021-09-24 }}. J. Soc. Arts, 33: 290.JOURNAL, 10.2307/1294478, 1294478, Hasler, Arthur D., Cultural Eutrophication is Reversible, BioScience, 1969, 19, 5, 425–431, JOURNAL, 10.1002/2016GB005586, A reevaluation of the magnitude and impacts of anthropogenic atmospheric nitrogen inputs on the ocean, 2017, Jickells, T. D., Buitenhuis, E., Altieri, K., Baker, A. R., Capone, D., Duce, R. A., Dentener, F., Fennel, K., Kanakidou, M., Laroche, J., Lee, K., Liss, P., Middelburg, J. J., Moore, J. K., Okin, G., Oschlies, A., Sarin, M., Seitzinger, S., Sharples, J., Singh, A., Suntharalingam, P., Uematsu, M., Zamora, L. M., Global Biogeochemical Cycles, 31, 2, 289, 2017GBioC..31..289J, 1874/348077, 5158406, free, A key example is that of cultural eutrophication, where agricultural runoff leads to nitrogen and phosphorus enrichment of coastal ecosystems, greatly increasing productivity resulting in algal blooms, deoxygenation of the water column and seabed, and increased greenhouse gas emissions,JOURNAL, 10.1029/2004GB002314, Exploring changes in river nitrogen export to the world’s oceans, 2005, Bouwman, A. F., Van Drecht, G., Knoop, J. M., Beusen, A. H. W., Meinardi, C. R., Global Biogeochemical Cycles, 19, 1, 2005GBioC..19.1002B, 131163837, free, with direct local and global impacts on nitrogen and carbon cycles. However, the runoff of organic matter from the mainland to coastal ecosystems is just one of a series of pressing threats stressing microbial communities due to global change. Climate change has also resulted in changes in the cryosphere, as glaciers and permafrost melt, resulting in intensified marine stratification, while shifts of the redox-state in different biomes are rapidly reshaping microbial assemblages at an unprecedented rate.JOURNAL, 10.1111/gcb.12754, Climate change and dead zones, 2015, Altieri, Andrew H., Gedan, Keryn B., Global Change Biology, 21, 4, 1395–1406, 25385668, 2015GCBio..21.1395A, 24002134, JOURNAL, 10.1126/science.aam7240, Declining oxygen in the global ocean and coastal waters, 2018, Breitburg, Denise, Levin, Lisa A., Oschlies, Andreas, Grégoire, Marilaure, Chavez, Francisco P., Conley, Daniel J., Garçon, Véronique, Gilbert, Denis, Gutiérrez, Dimitri, Isensee, Kirsten, Jacinto, Gil S., Limburg, Karin E., Montes, Ivonne, Naqvi, S. W. A., Pitcher, Grant C., Rabalais, Nancy N., Roman, Michael R., Rose, Kenneth A., Seibel, Brad A., Telszewski, Maciej, Yasuhara, Moriaki, Zhang, Jing, Science, 359, 6371, eaam7240, 29301986, 2018Sci...359M7240B, 206657115, free, JOURNAL, 10.1038/s41579-019-0222-5, Scientists’ warning to humanity: Microorganisms and climate change, 2019, Cavicchioli, Ricardo, Ripple, William J., Timmis, Kenneth N., Azam, Farooq, Bakken, Lars R., Baylis, Matthew, Behrenfeld, Michael J., Boetius, Antje, Boyd, Philip W., Classen, Aimée T., Crowther, Thomas W., Danovaro, Roberto, Foreman, Christine M., Huisman, Jef, Hutchins, David A., Jansson, Janet K., Karl, David M., Koskella, Britt, Mark Welch, David B., Martiny, Jennifer B. H., Moran, Mary Ann, Orphan, Victoria J., Reay, David S., Remais, Justin V., Rich, Virginia I., Singh, Brajesh K., Stein, Lisa Y., Stewart, Frank J., Sullivan, Matthew B., Van Oppen, Madeleine J. H., Nature Reviews Microbiology, 17, 9, 569–586, 31213707, 7136171, 1, JOURNAL, 10.1038/s41579-019-0178-5, Climate change microbiology — problems and perspectives, 2019, Hutchins, David A., Jansson, Janet K., Remais, Justin V., Rich, Virginia I., Singh, Brajesh K., Trivedi, Pankaj, Nature Reviews Microbiology, 17, 6, 391–396, 31092905, 155102440, JOURNAL, 10.3389/fmars.2019.00657, free, Editorial: Marine Microbiome and Biogeochemical Cycles in Marine Productive Areas, 2019, Murillo, Alejandro A., Molina, Verónica, Salcedo-Castro, Julio, Harrod, Chris, Frontiers in Marine Science, 6, (File:CC-BY icon.svg|50px) Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.Global change is, therefore, affecting key processes including primary productivity, CO2 and N2 fixation, organic matter respiration/remineralization, and the sinking and burial deposition of fixed CO2. In addition to this, oceans are experiencing an acidification process, with a change of ~0.1 pH units between the pre-industrial period and today, affecting carbonate/bicarbonate buffer chemistry. In turn, acidification has been reported to impact planktonic communities, principally through effects on calcifying taxa.JOURNAL, 10.1242/jeb.115584, Biochemical adaptation to ocean acidification, 2015, Stillman, Jonathon H., Paganini, Adam W., Journal of Experimental Biology, 218, 12, 1946–1955, 26085671, 13071345, free, There is also evidence for shifts in the production of key intermediary volatile products, some of which have marked greenhouse effects (e.g., N2O and CH4, reviewed by Breitburg in 2018, due to the increase in global temperature, ocean stratification and deoxygenation, driving as much as 25 to 50% of nitrogen loss from the ocean to the atmosphere in the so-called oxygen minimum zonesJOURNAL, 10.1038/s41579-018-0087-z, Microbial niches in marine oxygen minimum zones, 2018, Bertagnolli, Anthony D., Stewart, Frank J., Nature Reviews Microbiology, 16, 12, 723–729, 30250271, 52811177, or anoxic marine zones,JOURNAL, 10.1073/pnas.1205009109, Microbial oceanography of anoxic oxygen minimum zones, 2012, Ulloa, O., Canfield, D. E., Delong, E. F., Letelier, R. M., Stewart, F. J., Proceedings of the National Academy of Sciences, 109, 40, 15996–16003, 22967509, 3479542, 2012PNAS..10915996U, 6630698, free, driven by microbial processes. Other products, that are typically toxic for the marine nekton, including reduced sulfur species such as H2S, have a negative impact for marine resources like fisheries and coastal aquaculture. While global change has accelerated, there has been a parallel increase in awareness of the complexity of marine ecosystems, and especially the fundamental role of microbes as drivers of ecosystem functioning.

Lithosphere

Biosphere

Microorganisms drive much of the biogeochemical cycling in the earth system.JOURNAL, The Microbial Engines That Drive Earth’s Biogeochemical Cycles, 2008, 10.1126/science.1153213, Falkowski, P. G., Fenchel, T., Delong, E. F., Science, 320, 5879, 1034–1039, 18497287, 2008Sci...320.1034F, 2844984, JOURNAL, Redox-informed models of global biogeochemical cycles, 2020, 10.1038/s41467-020-19454-w, Zakem, Emily J., Polz, Martin F., Follows, Michael J., Nature Communications, 11, 1, 5680, 33173062, 7656242, 2020NatCo..11.5680Z, (File:CC-BY icon.svg|50px) Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.

Reservoirs

The chemicals are sometimes held for long periods of time in one place. This place is called a reservoir, which, for example, includes such things as coal deposits that are storing carbon for a long period of time.WEB, Baedke, Steve J., Fichter, Lynn S., Biogeochemical Cycles: Carbon Cycle,csmgeo.csm.jmu.edu/geollab/idls/carboncycle.htm, Supplemental Lecture Notes for Geol 398, James Madison University, 20 November 2017, 1 December 2017,csmgeo.csm.jmu.edu/geollab/idls/carboncycle.htm," title="web.archive.org/web/20171201043948csmgeo.csm.jmu.edu/geollab/idls/carboncycle.htm,">web.archive.org/web/20171201043948csmgeo.csm.jmu.edu/geollab/idls/carboncycle.htm, live, When chemicals are held for only short periods of time, they are being held in exchange pools. Examples of exchange pools include plants and animals.Plants and animals utilize carbon to produce carbohydrates, fats, and proteins, which can then be used to build their internal structures or to obtain energy. Plants and animals temporarily use carbon in their systems and then release it back into the air or surrounding medium. Generally, reservoirs are abiotic factors whereas exchange pools are biotic factors. Carbon is held for a relatively short time in plants and animals in comparison to coal deposits. The amount of time that a chemical is held in one place is called its residence time or turnover time (also called the renewal time or exit age).

Box models

{{see also|Climate box models}}(File:Simple box model.png|thumb|upright=1|right| Basic one-box model)Box models are widely used to model biogeochemical systems.JOURNAL, Sarmiento, J.L., Toggweiler, J.R., 1984, A new model for the role of the oceans in determining atmospheric P CO 2, Nature, 308, 621–24, 10.1038/308621a0, 5960, 1984Natur.308..621S, 4312683, Bianchi, Thomas (2007) Biogeochemistry of Estuaries {{Webarchive|url=https://web.archive.org/web/20210925012739books.google.com/books?id=3no8DwAAQBAJ&printsec=frontcover&dq=%22Biogeochemistry+of+Estuaries%22&hl=en&newbks=1&newbks_redir=0&sa=X&ved=2ahUKEwixq4PYm_brAhXYILcAHUVzBf0QuwUwAHoECAIQBw#v=onepage&q=%22Biogeochemistry%20of%20Estuaries%22&f=false |date=2021-09-25 }} page 9, Oxford University Press. {{ISBN|9780195160826}}. Box models are simplified versions of complex systems, reducing them to boxes (or storage reservoirs) for chemical materials, linked by material fluxes (flows). Simple box models have a small number of boxes with properties, such as volume, that do not change with time. The boxes are assumed to behave as if they were mixed homogeneously. These models are often used to derive analytical formulas describing the dynamics and steady-state abundance of the chemical species involved.The diagram at the right shows a basic one-box model. The reservoir contains the amount of material M under consideration, as defined by chemical, physical or biological properties. The source Q is the flux of material into the reservoir, and the sink S is the flux of material out of the reservoir. The budget is the check and balance of the sources and sinks affecting material turnover in a reservoir. The reservoir is in a steady state if Q = S, that is, if the sources balance the sinks and there is no change over time.The residence or turnover time is the average time material spends resident in the reservoir. If the reservoir is in a steady state, this is the same as the time it takes to fill or drain the reservoir. Thus, if τ is the turnover time, then τ = M/S. The equation describing the rate of change of content in a reservoir is
frac{dM}{dt} = Q - S = Q - frac{M}{tau}.
When two or more reservoirs are connected, the material can be regarded as cycling between the reservoirs, and there can be predictable patterns to the cyclic flow. More complex multibox models are usually solved using numerical techniques.File:Simplified budget of carbon flows in the ocean.png|thumb|upright=0.9|left| Simple three box model. Simplified budget of ocean carbon flowsMiddelburg, J.J.(2019) Marine carbon biogeochemistry: a primer for earth system scientists, page 5, Springer Nature. {{ISBN|9783030108229}}. {{doi|10.1007/978-3-030-10822-9}}. (File:CC-BY icon.svg|50px)( Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.)
|source =
|align = right
|width = 30em
}}The diagram on the left shows a simplified budget of ocean carbon flows. It is composed of three simple interconnected box models, one for the euphotic zone, one for the ocean interior or dark ocean, and one for ocean sediments. In the euphotic zone, net phytoplankton production is about 50 Pg C each year. About 10 Pg is exported to the ocean interior while the other 40 Pg is respired. Organic carbon degradation occurs as particles (marine snow) settle through the ocean interior. Only 2 Pg eventually arrives at the seafloor, while the other 8 Pg is respired in the dark ocean. In sediments, the time scale available for degradation increases by orders of magnitude with the result that 90% of the organic carbon delivered is degraded and only 0.2 Pg C yr−1 is eventually buried and transferred from the biosphere to the geosphere.(File:Simplified diagram of the global carbon cycle.jpg|thumb|upright=2.2|right| More complex model with many interacting boxes. Export and burial rates of terrestrial organic carbon in the ocean)The diagram on the right shows a more complex model with many interacting boxes. Reservoir masses here represents carbon stocks, measured in Pg C. Carbon exchange fluxes, measured in Pg C yr−1, occur between the atmosphere and its two major sinks, the land and the ocean. The black numbers and arrows indicate the reservoir mass and exchange fluxes estimated for the year 1750, just before the Industrial Revolution. The red arrows (and associated numbers) indicate the annual flux changes due to anthropogenic activities, averaged over the 2000–2009 time period. They represent how the carbon cycle has changed since 1750. Red numbers in the reservoirs represent the cumulative changes in anthropogenic carbon since the start of the Industrial Period, 1750–2011.JOURNAL, 10.1063/1.1510279, Sinks for Anthropogenic Carbon, 2002, Sarmiento, Jorge L., Gruber, Nicolas, Physics Today, 55, 8, 30–36, 2002PhT....55h..30S, 128553441, free, JOURNAL, 10.13140/2.1.1081.8883, 2013, Chhabra, Abha, Carbon and Other Biogeochemical Cycles, Intergovernmental Panel on Climate Change, JOURNAL, 10.3389/fmars.2016.00259, Perspectives on the Terrestrial Organic Matter Transport and Burial along the Land-Deep Sea Continuum: Caveats in Our Understanding of Biogeochemical Processes and Future Needs, 2016, Kandasamy, Selvaraj, Nagender Nath, Bejugam, Frontiers in Marine Science, 3, 30408500, free, (File:CC-BY icon.svg|50px) Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.{{clear}}

Fast and slow cycles

(File:Carbon cycle.jpg|thumb|upright=1.5| The fast cycle operates through the biosphere, including exchanges between land, atmosphere, and oceans. The yellow numbers are natural fluxes of carbon in billions of tons (gigatons) per year. Red are human contributions and white are stored carbon.WEB, Riebeek, Holli, The Carbon Cycle,earthobservatory.nasa.gov/Features/CarbonCycle/?src=eoa-features, Earth Observatory, NASA, 5 April 2018, 16 June 2011,earthobservatory.nasa.gov/Features/CarbonCycle/?src=eoa-features," title="web.archive.org/web/20160305010126earthobservatory.nasa.gov/Features/CarbonCycle/?src=eoa-features,">web.archive.org/web/20160305010126earthobservatory.nasa.gov/Features/CarbonCycle/?src=eoa-features, 5 March 2016, live, dmy-all, )(File:Rock cycle nps.PNG|thumb|upright=1.5|right| The slow cycle operates through rocks, including volcanic and tectonic activity)There are fast and slow biogeochemical cycles. Fast cycle operate in the biosphere and slow cycles operate in rocks. Fast or biological cycles can complete within years, moving substances from atmosphere to biosphere, then back to the atmosphere. Slow or geological cycles can take millions of years to complete, moving substances through the Earth’s crust between rocks, soil, ocean and atmosphere.Libes, Susan M. (2015). Blue planet: The role of the oceans in nutrient cycling, maintain the atmosphere system, and modulating climate change {{Webarchive|url=https://web.archive.org/web/20210120070507books.google.com/books?hl=en&lr=&id=5tC9CgAAQBAJ&oi=fnd&pg=PA89&dq=%22blue+planet%22+libes&ots=oesDSXq1NZ&sig=B7HrLG0Y6iE9p_AqfDfSVktQGN4#v=onepage&q=%22blue%20planet%22%20libes&f=false |date=2021-01-20 }} In: Routledge Handbook of Ocean Resources and Management, Routledge, pages 89–107. {{isbn|9781136294822}}.As an example, the fast carbon cycle is illustrated in the diagram below on the left. This cycle involves relatively short-term biogeochemical processes between the environment and living organisms in the biosphere. It includes movements of carbon between the atmosphere and terrestrial and marine ecosystems, as well as soils and seafloor sediments. The fast cycle includes annual cycles involving photosynthesis and decadal cycles involving vegetative growth and decomposition. The reactions of the fast carbon cycle to human activities will determine many of the more immediate impacts of climate change.JOURNAL, 10.1073/pnas.022055499, Atmospheric carbon dioxide levels for the last 500 million years, 2002, Rothman, D. H., Proceedings of the National Academy of Sciences, 99, 7, 4167–4171, 11904360, 123620, 2002PNAS...99.4167R, free, JOURNAL, 10.3390/sci1010017, Correlation between the Fluctuations in Worldwide Seismicity and Atmospheric Carbon Pollution, 2019, Carpinteri, Alberto, Niccolini, Gianni, Sci, 1, 17, free, (File:CC-BY icon.svg|50px) Material was copied from this source, which is available under a Creative Commons Attribution 4.0 International License {{Webarchive|url=https://web.archive.org/web/20171016050101creativecommons.org/licenses/by/4.0/ |date=2017-10-16 }}.JOURNAL, Rothman, Daniel, January 2015, Earth’s carbon cycle: A mathematical perspective,www.ams.org/bull/2015-52-01/S0273-0979-2014-01471-5/, Bulletin of the American Mathematical Society, en, 52, 1, 47–64, 10.1090/S0273-0979-2014-01471-5, 0273-0979, 1721.1/97900, free, 2021-09-27, 2021-11-22,web.archive.org/web/20211122221018/https://www.ams.org/journals/bull/2015-52-01/S0273-0979-2014-01471-5/, live, The slow cycle is illustrated in the diagram above on the right. It involves medium to long-term geochemical processes belonging to the rock cycle. The exchange between the ocean and atmosphere can take centuries, and the weathering of rocks can take millions of years. Carbon in the ocean precipitates to the ocean floor where it can form sedimentary rock and be subducted into the Earth’s mantle. Mountain building processes result in the return of this geologic carbon to the Earth’s surface. There the rocks are weathered and carbon is returned to the atmosphere by degassing and to the ocean by rivers. Other geologic carbon returns to the ocean through the hydrothermal emission of calcium ions. In a given year between 10 and 100 million tonnes of carbon moves around this slow cycle. This includes volcanoes returning geologic carbon directly to the atmosphere in the form of carbon dioxide. However, this is less than one percent of the carbon dioxide put into the atmosphere by burning fossil fuels.BOOK, 10.1007/978-3-030-15424-0_3,books.google.com/books?id=h_60DwAAQBAJ&q=%22Climate+Change+and+Renewable+Energy%22+%22The+Carbon+Cycle%22chapter+%3D+The+Carbon+Cycle&pg=PA109, Climate Change and Renewable Energy, 2020, Bush, Martin J., 109–141, 978-3-030-15423-3, 210305910, 2021-09-27, 2021-09-27,web.archive.org/web/20210927001642/https://books.google.com/books?id=h_60DwAAQBAJ&q=%22Climate+Change+and+Renewable+Energy%22+%22The+Carbon+Cycle%22chapter+%3D+The+Carbon+Cycle&pg=PA109, live,

Deep cycles

{{further|Deep carbon cycle}}The terrestrial subsurface is the largest reservoir of carbon on earth, containing 14–135 Pg of carbonJOURNAL, 10.1111/1574-6941.12196, Weighing the deep continental biosphere, 2014, McMahon, Sean, Parnell, John, FEMS Microbiology Ecology, 87, 1, 113–120, 23991863, 9491320, free, 2014FEMME..87..113M, and 2–19% of all biomass.JOURNAL, 10.1073/pnas.1203849109, Global distribution of microbial abundance and biomass in subseafloor sediment, 2012, Kallmeyer, J., Pockalny, R., Adhikari, R. R., Smith, D. C., d’Hondt, S., Proceedings of the National Academy of Sciences, 109, 40, 16213–16216, 22927371, 3479597, free, Microorganisms drive organic and inorganic compound transformations in this environment and thereby control biogeochemical cycles. Current knowledge of the microbial ecology of the subsurface is primarily based on 16S ribosomal RNA (rRNA) gene sequences. Recent estimates show that

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